![]() ![]() ![]() Hopefully this post will keep me from having to start from scratch the next time this comes up and not rehash the same mistakes I made the first time around. ![]() While I came across several great resources providing information on how to download SRA files using the SRA Toolkit, I wanted to retain just the basics, and some example code, should this type of request come across my desk again in the future. This is a short post primarily to help me (and hopefully others) remember how to do this once you have a set of SRR IDs of interest. A collaborator recently asked if I could help pull down a few thousand sequence files from the NCBI Sequence Read Archive (SRA) for a secondary analysis. ![]()
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